PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00513.1.g00180.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 245aa    MW: 26157.4 Da    PI: 5.1529
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00513.1.g00180.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.81e-1684133355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  Zpz_sc00513.1.g00180.1.sm.mk  84 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 133
                                   57******.**********32..2.24***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.3E-3083147IPR001471AP2/ERF domain
PROSITE profilePS5103221.64183141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-2884142IPR001471AP2/ERF domain
PRINTSPR003671.7E-88495IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2184143IPR016177DNA-binding domain
PfamPF008472.2E-1284133IPR001471AP2/ERF domain
CDDcd000183.51E-1484118No hitNo description
PRINTSPR003671.7E-8107123IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MEQEKHSAPA AAEAASDAPL PFDTVLQLEA ILLGTDTDST VPCSDMSTSS ELEDGRGSSA  60
ATNDHLQRPH PGYSQVPKQP PAAFIGVRKR PWGKFAAEIR DSTRKGARVW LGTFDTPEAA  120
ALAYDQAAFS ARGAAAVLNF PLECVRESLA AMALTAGSSP ILALKRRHSK RTRRRKVPPV  180
SDGSKDPTPP ACRRSDESAV LGSTVEVPQQ QATAPCPFDC SVNVVELEEL GADYLDELLW  240
MSSGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A4e-2484144666ATERF1
2gcc_A4e-2484144666ATERF1
1gcc_A4e-2484144363ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276831e-88KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979115.19e-51PREDICTED: ethylene-responsive transcription factor ERF094-like
SwissprotQ8VYM01e-39ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLK3ZLM54e-49K3ZLM5_SETIT; Uncharacterized protein
STRINGSi027485m1e-48(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2868035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.14e-35ethylene-responsive element binding factor 15